Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.8□□□□□ -0.36
SRRM4A7MD48 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SRRM4A7MD48 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SRRM4A7MD48 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRRM4A7MD48 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRRM4A7MD48 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SRRM4A7MD48 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SRRM4A7MD48 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.8□□□□□ -0.36
SRRM4A7MD48 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SRRM4A7MD48 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRRM4A7MD48 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRRM4A7MD48 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRRM4A7MD48 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SRRM4A7MD48 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRRM4A7MD48 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRRM4A7MD48 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SRRM4A7MD48 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 AC023157.3-201ENST00000619086 2088 ntBASIC12.79□□□□□ -0.36
SRRM4A7MD48 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 AC112693.3-201ENST00000624819 1983 ntBASIC12.79□□□□□ -0.36
SRRM4A7MD48 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 AC023824.1-201ENST00000562945 2975 ntBASIC12.79□□□□□ -0.36
SRRM4A7MD48 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.79□□□□□ -0.36
SRRM4A7MD48 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRRM4A7MD48 AC127383.1-201ENST00000444697 1800 ntBASIC12.78□□□□□ -0.36
SRRM4A7MD48 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 RPSAP43-201ENST00000402237 625 ntBASIC12.78□□□□□ -0.36
SRRM4A7MD48 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 AL627223.1-201ENST00000416693 442 ntBASIC12.78□□□□□ -0.36
SRRM4A7MD48 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 GPS2P2-201ENST00000430745 888 ntBASIC12.78□□□□□ -0.36
SRRM4A7MD48 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 BANF1P1-201ENST00000553684 263 ntBASIC12.78□□□□□ -0.36
SRRM4A7MD48 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 AC010327.4-202ENST00000591484 748 ntBASIC12.78□□□□□ -0.36
SRRM4A7MD48 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 AC018529.1-201ENST00000613063 361 ntBASIC12.78□□□□□ -0.36
SRRM4A7MD48 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms