Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 IGHV3-71-201ENST00000523324 359 ntBASIC16.5■□□□□ 0.23
SRRM3A6NNA2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 AL662799.1-202ENST00000614205 422 ntBASIC16.5■□□□□ 0.23
SRRM3A6NNA2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 MROH4P-201ENST00000431302 1578 ntBASIC16.5■□□□□ 0.23
SRRM3A6NNA2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 AC008677.1-201ENST00000519230 1561 ntBASIC16.5■□□□□ 0.23
SRRM3A6NNA2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 GPAA1P2-202ENST00000606848 1787 ntBASIC16.49■□□□□ 0.23
SRRM3A6NNA2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 AC107890.1-201ENST00000422478 521 ntBASIC16.49■□□□□ 0.23
SRRM3A6NNA2 KRT17P7-201ENST00000451704 1104 ntBASIC16.49■□□□□ 0.23
SRRM3A6NNA2 TIMM8BP1-201ENST00000452384 211 ntBASIC16.49■□□□□ 0.23
SRRM3A6NNA2 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 SPDYE22P-201ENST00000582158 798 ntBASIC16.49■□□□□ 0.23
SRRM3A6NNA2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 AL390754.1-201ENST00000619088 582 ntBASIC16.49■□□□□ 0.23
SRRM3A6NNA2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 FO538757.1-201ENST00000623083 1397 ntBASIC16.49■□□□□ 0.23
SRRM3A6NNA2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM3A6NNA2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM3A6NNA2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.48■□□□□ 0.23
SRRM3A6NNA2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SRRM3A6NNA2 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.48■□□□□ 0.23
SRRM3A6NNA2 C8orf49-201ENST00000525043 1968 ntBASIC16.48■□□□□ 0.23
SRRM3A6NNA2 NCF1C-201ENST00000438382 1427 ntBASIC16.48■□□□□ 0.23
SRRM3A6NNA2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM3A6NNA2 AC132938.5-201ENST00000624980 1813 ntBASIC16.48■□□□□ 0.23
SRRM3A6NNA2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SRRM3A6NNA2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.48■□□□□ 0.23
SRRM3A6NNA2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM3A6NNA2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM3A6NNA2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM3A6NNA2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.48■□□□□ 0.23
SRRM3A6NNA2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM3A6NNA2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms