Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPDC1A2A3K4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 AC020658.6-201ENST00000623564 1870 ntBASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 AC136621.1-201ENST00000624017 2304 ntBASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 AC004987.2-201ENST00000395959 1148 ntBASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 AC009118.2-201ENST00000613275 655 ntBASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 AC087499.5-201ENST00000452760 1342 ntBASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 AC092127.1-201ENST00000567093 3455 ntBASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPDC1A2A3K4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PTPDC1A2A3K4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.64■□□□□ 0.58
PTPDC1A2A3K4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTPDC1A2A3K4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
PTPDC1A2A3K4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 AC144831.1-201ENST00000573312 2656 ntBASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 SSR4P1-203ENST00000599569 2260 ntBASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 AF228730.6-201ENST00000641497 218 ntBASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 AC084121.3-201ENST00000641716 218 ntBASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 AC105233.6-201ENST00000642093 218 ntBASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTPDC1A2A3K4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms