Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 ACTG1P4-201ENST00000425123 1122 ntBASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 STRCP1-201ENST00000509801 5328 ntBASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 RN7SL471P-201ENST00000580476 299 ntBASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 Z82170.1-201ENST00000625081 3192 ntBASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAPPC1Q9Y5R8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 AL353692.3-201ENST00000407031 1396 ntBASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 PPT1-213ENST00000641319 2388 ntBASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 AC005622.1-201ENST00000636801 1703 ntBASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 AL139385.1-201ENST00000611744 3272 ntBASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAPPC1Q9Y5R8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms