Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD9Q9P000 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.63□□□□□ -0.23
COMMD9Q9P000 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 BX005266.1-201ENST00000473402 457 ntBASIC13.62□□□□□ -0.23
COMMD9Q9P000 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 AP001269.4-201ENST00000609611 512 ntBASIC13.62□□□□□ -0.23
COMMD9Q9P000 AL589182.2-201ENST00000619332 1049 ntBASIC13.62□□□□□ -0.23
COMMD9Q9P000 AC007191.1-201ENST00000623179 2995 ntBASIC13.62□□□□□ -0.23
COMMD9Q9P000 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD9Q9P000 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.62□□□□□ -0.23
COMMD9Q9P000 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 AL512652.2-201ENST00000625156 1716 ntBASIC13.61□□□□□ -0.23
COMMD9Q9P000 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms