Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 AL589702.1-201ENST00000641229 1509 ntBASIC19.56■□□□□ 0.72
UPF2Q9HAU5 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 AKR1C7P-201ENST00000305623 895 ntBASIC19.55■□□□□ 0.72
UPF2Q9HAU5 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 AF238378.1-201ENST00000526806 358 ntBASIC19.55■□□□□ 0.72
UPF2Q9HAU5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 PRELID1P1-202ENST00000567272 903 ntBASIC19.55■□□□□ 0.72
UPF2Q9HAU5 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.55■□□□□ 0.72
UPF2Q9HAU5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 AC026396.1-201ENST00000419388 421 ntBASIC19.54■□□□□ 0.72
UPF2Q9HAU5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 FAM210CP-201ENST00000445714 574 ntBASIC19.54■□□□□ 0.72
UPF2Q9HAU5 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms