Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 AC008894.3-201ENST00000624324 3103 ntBASIC18.67■□□□□ 0.58
RNF41Q9H4P4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 AP003680.1-201ENST00000598970 3660 ntBASIC18.67■□□□□ 0.58
RNF41Q9H4P4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 MEP1AP4-201ENST00000423244 1087 ntBASIC18.66■□□□□ 0.58
RNF41Q9H4P4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
RNF41Q9H4P4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.65■□□□□ 0.58
RNF41Q9H4P4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 SPDYE19P-201ENST00000338590 713 ntBASIC18.65■□□□□ 0.58
RNF41Q9H4P4 AC093004.1-201ENST00000508850 424 ntBASIC18.65■□□□□ 0.58
RNF41Q9H4P4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.65■□□□□ 0.58
RNF41Q9H4P4 AC004233.3-201ENST00000607794 1269 ntBASIC18.65■□□□□ 0.58
RNF41Q9H4P4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF41Q9H4P4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF41Q9H4P4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RNF41Q9H4P4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF41Q9H4P4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF41Q9H4P4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF41Q9H4P4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.64■□□□□ 0.58
RNF41Q9H4P4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 PRAL-201ENST00000624952 3286 ntBASIC18.64■□□□□ 0.57
RNF41Q9H4P4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 KRT18P64-201ENST00000434946 1219 ntBASIC18.64■□□□□ 0.57
RNF41Q9H4P4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 TPRX2P-201ENST00000535362 881 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms