Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 SPCS2P4-201ENST00000436160 681 ntBASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 KRT8P48-201ENST00000515599 1220 ntBASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 AP000842.3-202ENST00000569238 1080 ntBASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC68Q9H2F9 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 AL592309.1-201ENST00000443127 649 ntBASIC16■□□□□ 0.15
CCDC68Q9H2F9 CEND1P1-201ENST00000451006 455 ntBASIC16■□□□□ 0.15
CCDC68Q9H2F9 ALG1L5P-201ENST00000482043 771 ntBASIC16■□□□□ 0.15
CCDC68Q9H2F9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 AC005829.1-201ENST00000570002 483 ntBASIC16■□□□□ 0.15
CCDC68Q9H2F9 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC68Q9H2F9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
CCDC68Q9H2F9 ELL2P1-201ENST00000413990 1906 ntBASIC16■□□□□ 0.15
CCDC68Q9H2F9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 AC134407.2-201ENST00000625089 1978 ntBASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 FAM220BP-201ENST00000377689 816 ntBASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 MIR3687-2-201ENST00000577708 61 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms