Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 AC004233.3-201ENST00000607794 1269 ntBASIC16.35■□□□□ 0.21
RPRD1AQ96P16 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPRD1AQ96P16 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 AC136604.1-201ENST00000418535 575 ntBASIC16.34■□□□□ 0.21
RPRD1AQ96P16 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 SPTLC1P1-201ENST00000447199 261 ntBASIC16.34■□□□□ 0.21
RPRD1AQ96P16 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 TIMM17BP1-201ENST00000545713 516 ntBASIC16.34■□□□□ 0.21
RPRD1AQ96P16 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.34■□□□□ 0.21
RPRD1AQ96P16 LINC01115-203ENST00000606068 577 ntBASIC16.34■□□□□ 0.21
RPRD1AQ96P16 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.34■□□□□ 0.21
RPRD1AQ96P16 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPRD1AQ96P16 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPRD1AQ96P16 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
RPRD1AQ96P16 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPRD1AQ96P16 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.33■□□□□ 0.21
RPRD1AQ96P16 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPRD1AQ96P16 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.33■□□□□ 0.21
RPRD1AQ96P16 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPRD1AQ96P16 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 DOC2GP-202ENST00000514950 1163 ntBASIC16.33■□□□□ 0.2
RPRD1AQ96P16 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms