Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PGBD1Q96JS3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 AP002414.2-201ENST00000591780 3365 ntBASIC18.43■□□□□ 0.54
PGBD1Q96JS3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 MST1L-201ENST00000442552 2185 ntBASIC18.43■□□□□ 0.54
PGBD1Q96JS3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 AL079307.3-201ENST00000556114 283 ntBASIC18.43■□□□□ 0.54
PGBD1Q96JS3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 AC009090.5-201ENST00000624886 2285 ntBASIC18.43■□□□□ 0.54
PGBD1Q96JS3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 AC090616.6-203ENST00000579186 1945 ntBASIC18.43■□□□□ 0.54
PGBD1Q96JS3 AC092127.1-201ENST00000567093 3455 ntBASIC18.43■□□□□ 0.54
PGBD1Q96JS3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PGBD1Q96JS3 AL035456.1-201ENST00000456064 1369 ntBASIC18.42■□□□□ 0.54
PGBD1Q96JS3 CYP4F24P-201ENST00000586049 1580 ntBASIC18.42■□□□□ 0.54
PGBD1Q96JS3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 AC138035.3-201ENST00000622706 2791 ntBASIC18.42■□□□□ 0.54
PGBD1Q96JS3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 AC100757.3-201ENST00000622361 1406 ntBASIC18.42■□□□□ 0.54
PGBD1Q96JS3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 AL080243.2-201ENST00000418783 582 ntBASIC18.42■□□□□ 0.54
PGBD1Q96JS3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 UGT1A2P-201ENST00000454886 866 ntBASIC18.42■□□□□ 0.54
PGBD1Q96JS3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 TEX28P1-201ENST00000613479 1221 ntBASIC18.42■□□□□ 0.54
PGBD1Q96JS3 TEX28P2-201ENST00000617764 1221 ntBASIC18.42■□□□□ 0.54
PGBD1Q96JS3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 TSPY26P-202ENST00000565928 3884 ntBASIC18.42■□□□□ 0.54
PGBD1Q96JS3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 CETN4P-206ENST00000642099 2168 ntBASIC18.42■□□□□ 0.54
PGBD1Q96JS3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.42■□□□□ 0.54
PGBD1Q96JS3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PGBD1Q96JS3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.41■□□□□ 0.54
PGBD1Q96JS3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms