Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 AC074338.1-201ENST00000416825 156 ntBASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 MIR6805-201ENST00000615055 62 ntBASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 MIR1909-201ENST00000411312 80 ntBASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 HLA-V-201ENST00000429037 534 ntBASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 AC007389.4-201ENST00000454674 793 ntBASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 SLED1-202ENST00000512051 380 ntBASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 AC097359.3-201ENST00000603982 1210 ntBASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 AL033527.5-201ENST00000641382 801 ntBASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP6V0A1Q93050 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ATP6V0A1Q93050 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
ATP6V0A1Q93050 AC018892.3-201ENST00000623986 2499 ntBASIC17.71■□□□□ 0.42
ATP6V0A1Q93050 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
ATP6V0A1Q93050 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 TMEM14DP-201ENST00000422205 345 ntBASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms