Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 CA5BP1-205ENST00000435806 1064 ntBASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 RBM14-205ENST00000443702 732 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 RN7SL288P-201ENST00000490496 291 ntBASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 SEPHS2P1-201ENST00000511618 1162 ntBASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AC087392.5-201ENST00000612517 489 ntBASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 HINT1-208ENST00000513012 583 ntTSL 4 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AC068831.5-201ENST00000557387 328 ntBASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 SRP14-208ENST00000560773 468 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SYNE2Q8WXH0 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 MST1L-201ENST00000442552 2185 ntBASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 AC046168.2-202ENST00000561123 926 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 TUBB8P7-204ENST00000567960 1332 ntBASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 E2F3P2-201ENST00000447755 1422 ntBASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 RNF7-202ENST00000393000 805 ntTSL 2 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 CASP3-205ENST00000517513 964 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 PIGA-209ENST00000634582 965 ntTSL 2 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 VDAC1P1-201ENST00000439229 848 ntBASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 AC093826.1-201ENST00000508655 993 ntBASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 AC011431.1-201ENST00000512971 230 ntBASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 LINC00565-201ENST00000562710 2331 ntBASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 RN7SL487P-201ENST00000468140 344 ntBASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms