Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 AP003680.1-201ENST00000598970 3660 ntBASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 AC073621.1-201ENST00000392730 636 ntBASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 AL732292.2-201ENST00000609649 430 ntBASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 WASH6P-202ENST00000359512 1437 ntBASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 C18orf15-201ENST00000623680 2534 ntBASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IL1Q8TBN0 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 AC087386.2-201ENST00000623212 4637 ntBASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 AC136632.2-201ENST00000512891 861 ntBASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 IGHV3-65-201ENST00000523210 341 ntBASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 MIR4321-201ENST00000592276 80 ntBASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 AC008608.2-201ENST00000606089 416 ntBASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IL1Q8TBN0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 AC126365.1-201ENST00000578585 1514 ntBASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.89■□□□□ 0.13
RAB3IL1Q8TBN0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms