Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC136621.1-201ENST00000624017 2304 ntBASIC14.88□□□□□ -0.03
NUP43Q8NFH3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.88□□□□□ -0.03
NUP43Q8NFH3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 AL596442.2-201ENST00000610240 980 ntBASIC14.88□□□□□ -0.03
NUP43Q8NFH3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 MIR6080-201ENST00000617359 66 ntBASIC14.88□□□□□ -0.03
NUP43Q8NFH3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 AC087481.3-201ENST00000602886 1894 ntBASIC14.87□□□□□ -0.03
NUP43Q8NFH3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 MTND6P24-201ENST00000440466 518 ntBASIC14.87□□□□□ -0.03
NUP43Q8NFH3 AC004967.1-201ENST00000453589 447 ntBASIC14.87□□□□□ -0.03
NUP43Q8NFH3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 MIR4453-201ENST00000584019 89 ntBASIC14.87□□□□□ -0.03
NUP43Q8NFH3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 RN7SL828P-201ENST00000607615 303 ntBASIC14.87□□□□□ -0.03
NUP43Q8NFH3 AC007967.4-201ENST00000614700 386 ntBASIC14.87□□□□□ -0.03
NUP43Q8NFH3 AP001059.3-201ENST00000619053 235 ntBASIC14.87□□□□□ -0.03
NUP43Q8NFH3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 AC105250.1-201ENST00000509378 2057 ntBASIC14.87□□□□□ -0.03
NUP43Q8NFH3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUP43Q8NFH3 AC126177.1-201ENST00000547829 2218 ntBASIC14.86□□□□□ -0.03
NUP43Q8NFH3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP43Q8NFH3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NUP43Q8NFH3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NUP43Q8NFH3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUP43Q8NFH3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NUP43Q8NFH3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NUP43Q8NFH3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms