Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC170Q8IYT3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC170Q8IYT3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC170Q8IYT3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC170Q8IYT3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC170Q8IYT3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC170Q8IYT3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC170Q8IYT3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC170Q8IYT3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 AC093909.1-201ENST00000504731 1122 ntBASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 AC105233.2-201ENST00000523697 349 ntBASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 AF228730.5-201ENST00000530288 346 ntBASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 KRT19P2-202ENST00000557173 1012 ntBASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC170Q8IYT3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CCDC170Q8IYT3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.08■□□□□ 0.33
CCDC170Q8IYT3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CCDC170Q8IYT3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.08■□□□□ 0.33
CCDC170Q8IYT3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC170Q8IYT3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC170Q8IYT3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CCDC170Q8IYT3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.08■□□□□ 0.33
CCDC170Q8IYT3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC170Q8IYT3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CCDC170Q8IYT3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC170Q8IYT3 AC148477.4-201ENST00000613430 1793 ntBASIC17.08■□□□□ 0.33
CCDC170Q8IYT3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 RPS8P6-201ENST00000426177 609 ntBASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 KRT18P56-201ENST00000507275 550 ntBASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC170Q8IYT3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC170Q8IYT3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC170Q8IYT3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC170Q8IYT3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC170Q8IYT3 MROH4P-201ENST00000431302 1578 ntBASIC17.07■□□□□ 0.32
CCDC170Q8IYT3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC170Q8IYT3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC170Q8IYT3 FOXO1B-201ENST00000504678 1527 ntBASIC17.07■□□□□ 0.32
CCDC170Q8IYT3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC170Q8IYT3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms