Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.47□□□□□ -0.09
CROCCP3Q8IVE0 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CROCCP3Q8IVE0 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CROCCP3Q8IVE0 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.46□□□□□ -0.1
CROCCP3Q8IVE0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CROCCP3Q8IVE0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.46□□□□□ -0.1
CROCCP3Q8IVE0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.46□□□□□ -0.1
CROCCP3Q8IVE0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.46□□□□□ -0.1
CROCCP3Q8IVE0 KRT8P44-201ENST00000441609 1350 ntBASIC14.46□□□□□ -0.1
CROCCP3Q8IVE0 AC243591.1-201ENST00000452967 1364 ntBASIC14.46□□□□□ -0.1
CROCCP3Q8IVE0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.46□□□□□ -0.1
CROCCP3Q8IVE0 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CROCCP3Q8IVE0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CROCCP3Q8IVE0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.46□□□□□ -0.1
CROCCP3Q8IVE0 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
CROCCP3Q8IVE0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CROCCP3Q8IVE0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 AC246785.2-201ENST00000432512 513 ntBASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms