Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 LINC00552-201ENST00000625151 2579 ntBASIC12.44□□□□□ -0.42
ERVFC1-1P60608 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 AC005332.1-201ENST00000577698 1310 ntBASIC12.43□□□□□ -0.42
ERVFC1-1P60608 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 NUS1P1-201ENST00000446295 882 ntBASIC12.43□□□□□ -0.42
ERVFC1-1P60608 KRT18P38-201ENST00000449496 1282 ntBASIC12.43□□□□□ -0.42
ERVFC1-1P60608 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 SIGLEC30P-201ENST00000455569 941 ntBASIC12.43□□□□□ -0.42
ERVFC1-1P60608 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 AL390719.2-201ENST00000606993 987 ntBASIC12.43□□□□□ -0.42
ERVFC1-1P60608 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 PGM5P2-202ENST00000637225 1043 ntBASIC12.43□□□□□ -0.42
ERVFC1-1P60608 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 CICP17-201ENST00000418553 2377 ntBASIC12.43□□□□□ -0.42
ERVFC1-1P60608 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 TOP3BP1-201ENST00000420768 1380 ntBASIC12.43□□□□□ -0.42
ERVFC1-1P60608 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.43□□□□□ -0.42
ERVFC1-1P60608 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ERVFC1-1P60608 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ERVFC1-1P60608 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ERVFC1-1P60608 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ERVFC1-1P60608 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ERVFC1-1P60608 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
ERVFC1-1P60608 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.42□□□□□ -0.42
ERVFC1-1P60608 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ERVFC1-1P60608 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.42□□□□□ -0.42
ERVFC1-1P60608 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ERVFC1-1P60608 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
ERVFC1-1P60608 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms