Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH4P55283 API5-211ENST00000534695 560 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH4P55283 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH4P55283 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH4P55283 RRP7BP-205ENST00000566851 833 ntBASIC16.18■□□□□ 0.18
CDH4P55283 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH4P55283 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH4P55283 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.18■□□□□ 0.18
CDH4P55283 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CDH4P55283 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.18■□□□□ 0.18
CDH4P55283 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH4P55283 AC099568.2-201ENST00000609194 695 ntBASIC16.18■□□□□ 0.18
CDH4P55283 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH4P55283 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH4P55283 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CDH4P55283 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH4P55283 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDH4P55283 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH4P55283 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CDH4P55283 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH4P55283 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDH4P55283 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH4P55283 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDH4P55283 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH4P55283 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH4P55283 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH4P55283 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CDH4P55283 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH4P55283 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH4P55283 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CDH4P55283 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH4P55283 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH4P55283 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CDH4P55283 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.17■□□□□ 0.18
CDH4P55283 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH4P55283 SPDYE22P-201ENST00000582158 798 ntBASIC16.17■□□□□ 0.18
CDH4P55283 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH4P55283 AL391069.4-201ENST00000609583 481 ntBASIC16.17■□□□□ 0.18
CDH4P55283 AL158212.4-201ENST00000624062 1286 ntBASIC16.17■□□□□ 0.18
CDH4P55283 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH4P55283 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH4P55283 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH4P55283 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDH4P55283 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH4P55283 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
CDH4P55283 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDH4P55283 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH4P55283 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH4P55283 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH4P55283 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH4P55283 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 AL035633.1-201ENST00000406139 838 ntBASIC16.16■□□□□ 0.18
CDH4P55283 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH4P55283 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH4P55283 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH4P55283 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH4P55283 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.16■□□□□ 0.18
CDH4P55283 AL662799.1-202ENST00000614205 422 ntBASIC16.16■□□□□ 0.18
CDH4P55283 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH4P55283 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms