Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PMS1P54277 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 AC006058.4-201ENST00000624016 1670 ntBASIC17.46■□□□□ 0.39
PMS1P54277 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.46■□□□□ 0.39
PMS1P54277 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PMS1P54277 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.46■□□□□ 0.39
PMS1P54277 AP000344.2-201ENST00000512987 629 ntBASIC17.46■□□□□ 0.39
PMS1P54277 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.46■□□□□ 0.39
PMS1P54277 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.46■□□□□ 0.39
PMS1P54277 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PMS1P54277 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
PMS1P54277 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.45■□□□□ 0.38
PMS1P54277 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PMS1P54277 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.45■□□□□ 0.38
PMS1P54277 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PMS1P54277 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.45■□□□□ 0.38
PMS1P54277 MST1L-201ENST00000442552 2185 ntBASIC17.45■□□□□ 0.38
PMS1P54277 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.45■□□□□ 0.38
PMS1P54277 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PMS1P54277 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PMS1P54277 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.45■□□□□ 0.38
PMS1P54277 AC136604.1-201ENST00000418535 575 ntBASIC17.45■□□□□ 0.38
PMS1P54277 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.45■□□□□ 0.38
PMS1P54277 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.45■□□□□ 0.38
PMS1P54277 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.45■□□□□ 0.38
PMS1P54277 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.45■□□□□ 0.38
PMS1P54277 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.45■□□□□ 0.38
PMS1P54277 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.45■□□□□ 0.38
PMS1P54277 AC009093.7-201ENST00000623853 1223 ntBASIC17.45■□□□□ 0.38
PMS1P54277 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.45■□□□□ 0.38
PMS1P54277 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.45■□□□□ 0.38
PMS1P54277 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PMS1P54277 LINC02228-204ENST00000642115 2962 ntBASIC17.45■□□□□ 0.38
PMS1P54277 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.45■□□□□ 0.38
PMS1P54277 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PMS1P54277 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMS1P54277 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.44■□□□□ 0.38
PMS1P54277 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMS1P54277 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PMS1P54277 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.44■□□□□ 0.38
PMS1P54277 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.44■□□□□ 0.38
PMS1P54277 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.44■□□□□ 0.38
PMS1P54277 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
PMS1P54277 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMS1P54277 KRT8P44-201ENST00000441609 1350 ntBASIC17.44■□□□□ 0.38
PMS1P54277 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
PMS1P54277 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMS1P54277 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PMS1P54277 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PMS1P54277 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMS1P54277 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PMS1P54277 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PMS1P54277 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.44■□□□□ 0.38
PMS1P54277 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.44■□□□□ 0.38
PMS1P54277 AL353705.2-201ENST00000428243 662 ntBASIC17.44■□□□□ 0.38
PMS1P54277 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.44■□□□□ 0.38
PMS1P54277 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.44■□□□□ 0.38
PMS1P54277 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.44■□□□□ 0.38
PMS1P54277 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PMS1P54277 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.44■□□□□ 0.38
PMS1P54277 AC003101.2-201ENST00000612557 442 ntBASIC17.44■□□□□ 0.38
PMS1P54277 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.44■□□□□ 0.38
PMS1P54277 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMS1P54277 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMS1P54277 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMS1P54277 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.44■□□□□ 0.38
PMS1P54277 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMS1P54277 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PMS1P54277 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms