Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATXN3P54252 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATXN3P54252 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.3■□□□□ 0.2
ATXN3P54252 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.3■□□□□ 0.2
ATXN3P54252 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ATXN3P54252 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.3■□□□□ 0.2
ATXN3P54252 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.3■□□□□ 0.2
ATXN3P54252 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 AL645728.1-201ENST00000366221 2101 ntBASIC16.3■□□□□ 0.2
ATXN3P54252 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ATXN3P54252 AL136379.1-201ENST00000623471 2642 ntBASIC16.3■□□□□ 0.2
ATXN3P54252 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.3■□□□□ 0.2
ATXN3P54252 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ATXN3P54252 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.3■□□□□ 0.2
ATXN3P54252 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ATXN3P54252 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.3■□□□□ 0.2
ATXN3P54252 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.3■□□□□ 0.2
ATXN3P54252 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.3■□□□□ 0.2
ATXN3P54252 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.3■□□□□ 0.2
ATXN3P54252 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.3■□□□□ 0.2
ATXN3P54252 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.3■□□□□ 0.2
ATXN3P54252 AC135586.1-201ENST00000539323 574 ntBASIC16.3■□□□□ 0.2
ATXN3P54252 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.3■□□□□ 0.2
ATXN3P54252 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.3■□□□□ 0.2
ATXN3P54252 CYP2A7P1-201ENST00000595391 815 ntBASIC16.3■□□□□ 0.2
ATXN3P54252 AC008738.7-201ENST00000609744 511 ntBASIC16.3■□□□□ 0.2
ATXN3P54252 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
ATXN3P54252 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.3■□□□□ 0.2
ATXN3P54252 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.3■□□□□ 0.2
ATXN3P54252 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.3■□□□□ 0.2
ATXN3P54252 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.3■□□□□ 0.2
ATXN3P54252 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.3■□□□□ 0.2
ATXN3P54252 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.3■□□□□ 0.2
ATXN3P54252 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATXN3P54252 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ATXN3P54252 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.29■□□□□ 0.2
ATXN3P54252 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ATXN3P54252 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ATXN3P54252 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ATXN3P54252 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ATXN3P54252 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.29■□□□□ 0.2
ATXN3P54252 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
ATXN3P54252 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 AC068587.6-202ENST00000641839 5619 ntBASIC16.29■□□□□ 0.2
ATXN3P54252 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.29■□□□□ 0.2
ATXN3P54252 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.29■□□□□ 0.2
ATXN3P54252 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.29■□□□□ 0.2
ATXN3P54252 DFFBP1-201ENST00000433250 979 ntBASIC16.29■□□□□ 0.2
ATXN3P54252 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
ATXN3P54252 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.29■□□□□ 0.2
ATXN3P54252 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.29■□□□□ 0.2
ATXN3P54252 AC022494.1-201ENST00000466044 728 ntBASIC16.29■□□□□ 0.2
ATXN3P54252 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.29■□□□□ 0.2
ATXN3P54252 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.29■□□□□ 0.2
ATXN3P54252 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.29■□□□□ 0.2
ATXN3P54252 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.29■□□□□ 0.2
ATXN3P54252 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.29■□□□□ 0.2
ATXN3P54252 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.29■□□□□ 0.2
ATXN3P54252 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.29■□□□□ 0.2
ATXN3P54252 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.29■□□□□ 0.2
ATXN3P54252 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.29■□□□□ 0.2
ATXN3P54252 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms