Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CLCN4P51793 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCN4P51793 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN4P51793 ALOX12P2-203ENST00000570921 1945 ntBASIC16.6■□□□□ 0.25
CLCN4P51793 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 AL121723.1-201ENST00000445194 1519 ntBASIC16.6■□□□□ 0.25
CLCN4P51793 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLCN4P51793 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLCN4P51793 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CLCN4P51793 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLCN4P51793 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCN4P51793 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CLCN4P51793 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 YBX1P6-201ENST00000442962 1002 ntBASIC16.6■□□□□ 0.25
CLCN4P51793 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.6■□□□□ 0.25
CLCN4P51793 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCN4P51793 AC079316.1-201ENST00000548397 411 ntBASIC16.6■□□□□ 0.25
CLCN4P51793 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.6■□□□□ 0.25
CLCN4P51793 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCN4P51793 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLCN4P51793 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCN4P51793 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.6■□□□□ 0.25
CLCN4P51793 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCN4P51793 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLCN4P51793 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLCN4P51793 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN4P51793 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCN4P51793 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLCN4P51793 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLCN4P51793 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CLCN4P51793 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCN4P51793 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLCN4P51793 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 AC026954.1-201ENST00000429771 1293 ntBASIC16.59■□□□□ 0.25
CLCN4P51793 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.59■□□□□ 0.25
CLCN4P51793 AC026410.3-201ENST00000514280 936 ntBASIC16.59■□□□□ 0.25
CLCN4P51793 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCN4P51793 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.59■□□□□ 0.25
CLCN4P51793 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CLCN4P51793 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCN4P51793 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCN4P51793 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCN4P51793 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCN4P51793 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLCN4P51793 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN4P51793 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCN4P51793 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCN4P51793 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCN4P51793 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCN4P51793 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCN4P51793 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.58■□□□□ 0.25
CLCN4P51793 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLCN4P51793 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.58■□□□□ 0.25
CLCN4P51793 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CLCN4P51793 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
CLCN4P51793 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLCN4P51793 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.58■□□□□ 0.25
CLCN4P51793 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN4P51793 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCN4P51793 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CLCN4P51793 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CLCN4P51793 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCN4P51793 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN4P51793 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN4P51793 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCN4P51793 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN4P51793 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN4P51793 KRT90P-201ENST00000549264 1064 ntBASIC16.58■□□□□ 0.24
CLCN4P51793 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCN4P51793 GNRHR2-203ENST00000581100 1187 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms