Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC10.6□□□□□ -0.71
PCP4P48539 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 HSPH1-209ENST00000630972 3570 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
PCP4P48539 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 AC106820.4-201ENST00000561847 5616 ntBASIC10.59□□□□□ -0.71
PCP4P48539 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
PCP4P48539 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC10.59□□□□□ -0.71
PCP4P48539 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 PHF8-201ENST00000322659 2921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.59□□□□□ -0.71
PCP4P48539 NME1-209ENST00000511355 1645 ntTSL 5 BASIC10.59□□□□□ -0.71
PCP4P48539 RGL4-210ENST00000615003 3014 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
PCP4P48539 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
PCP4P48539 ADGRE4P-201ENST00000597372 1810 ntBASIC10.59□□□□□ -0.71
PCP4P48539 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC10.59□□□□□ -0.71
PCP4P48539 SIGLEC10-206ENST00000441969 2768 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 EVL-203ENST00000544450 3704 ntTSL 2 BASIC10.59□□□□□ -0.71
PCP4P48539 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 AC005014.1-201ENST00000432006 2976 ntBASIC10.59□□□□□ -0.71
PCP4P48539 AC022596.2-201ENST00000635352 3078 ntBASIC10.59□□□□□ -0.71
PCP4P48539 AC092902.5-201ENST00000641650 3256 ntBASIC10.59□□□□□ -0.71
PCP4P48539 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 SLC45A4-202ENST00000517878 3470 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC10.59□□□□□ -0.71
PCP4P48539 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 CIITA-212ENST00000618207 2844 ntTSL 5 BASIC10.59□□□□□ -0.71
PCP4P48539 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC10.59□□□□□ -0.71
PCP4P48539 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
PCP4P48539 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC10.59□□□□□ -0.71
PCP4P48539 ZC3HC1-202ENST00000358303 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 NLRC3-201ENST00000324659 3414 ntTSL 5 BASIC10.59□□□□□ -0.71
PCP4P48539 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 TRERF1-203ENST00000372917 3914 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 TLE4-201ENST00000265284 2382 ntTSL 2 BASIC10.59□□□□□ -0.71
PCP4P48539 LINC01634-201ENST00000443243 2379 ntTSL 2 BASIC10.59□□□□□ -0.71
PCP4P48539 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC10.59□□□□□ -0.71
PCP4P48539 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC10.59□□□□□ -0.71
PCP4P48539 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PCP4P48539 DUSP27-202ENST00000361200 4164 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.71
PCP4P48539 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
PCP4P48539 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC10.58□□□□□ -0.72
PCP4P48539 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC10.58□□□□□ -0.72
PCP4P48539 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
PCP4P48539 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC10.58□□□□□ -0.72
PCP4P48539 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC10.58□□□□□ -0.72
PCP4P48539 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
PCP4P48539 CASP3-206ENST00000523916 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 SEC14L1-212ENST00000585618 2712 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
PCP4P48539 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 CAPRIN1-202ENST00000389645 3498 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
PCP4P48539 DBH-202ENST00000393056 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 PEG10-203ENST00000488574 2587 ntTSL 2 BASIC10.58□□□□□ -0.72
PCP4P48539 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 DLX4-206ENST00000611342 1662 ntBASIC10.58□□□□□ -0.72
PCP4P48539 HEIH-201ENST00000623091 1652 ntBASIC10.58□□□□□ -0.72
PCP4P48539 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
PCP4P48539 SSR1P1-201ENST00000407630 814 ntBASIC10.58□□□□□ -0.72
PCP4P48539 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
PCP4P48539 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
PCP4P48539 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 FAM214B-201ENST00000322813 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
PCP4P48539 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC10.58□□□□□ -0.72
PCP4P48539 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PCP4P48539 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC10.58□□□□□ -0.72
PCP4P48539 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms