Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MMP8P22894 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.66■□□□□ 0.26
MMP8P22894 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.66■□□□□ 0.26
MMP8P22894 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.66■□□□□ 0.26
MMP8P22894 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MMP8P22894 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 AL645939.2-201ENST00000427340 991 ntBASIC16.66■□□□□ 0.26
MMP8P22894 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.66■□□□□ 0.26
MMP8P22894 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.66■□□□□ 0.26
MMP8P22894 AC140878.1-201ENST00000565277 250 ntBASIC16.66■□□□□ 0.26
MMP8P22894 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.66■□□□□ 0.26
MMP8P22894 AC025048.3-201ENST00000590609 569 ntBASIC16.66■□□□□ 0.26
MMP8P22894 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.66■□□□□ 0.26
MMP8P22894 AC005702.4-201ENST00000618393 416 ntBASIC16.66■□□□□ 0.26
MMP8P22894 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.66■□□□□ 0.26
MMP8P22894 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.66■□□□□ 0.26
MMP8P22894 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.66■□□□□ 0.26
MMP8P22894 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MMP8P22894 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.66■□□□□ 0.26
MMP8P22894 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.66■□□□□ 0.26
MMP8P22894 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.66■□□□□ 0.26
MMP8P22894 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.66■□□□□ 0.26
MMP8P22894 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
MMP8P22894 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MMP8P22894 AL109954.1-202ENST00000564051 2148 ntBASIC16.66■□□□□ 0.26
MMP8P22894 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP8P22894 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP8P22894 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP8P22894 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP8P22894 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MMP8P22894 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP8P22894 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
MMP8P22894 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MMP8P22894 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP8P22894 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MMP8P22894 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP8P22894 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP8P22894 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.65■□□□□ 0.26
MMP8P22894 AC107890.1-201ENST00000422478 521 ntBASIC16.65■□□□□ 0.26
MMP8P22894 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP8P22894 AC067863.1-201ENST00000494933 530 ntBASIC16.65■□□□□ 0.26
MMP8P22894 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.65■□□□□ 0.26
MMP8P22894 AC069120.2-201ENST00000524091 540 ntBASIC16.65■□□□□ 0.26
MMP8P22894 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.65■□□□□ 0.26
MMP8P22894 AL512361.1-201ENST00000554200 418 ntBASIC16.65■□□□□ 0.26
MMP8P22894 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MMP8P22894 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP8P22894 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.65■□□□□ 0.26
MMP8P22894 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.65■□□□□ 0.26
MMP8P22894 AC073592.8-201ENST00000624126 511 ntBASIC16.65■□□□□ 0.26
MMP8P22894 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP8P22894 AC144831.1-201ENST00000573312 2656 ntBASIC16.65■□□□□ 0.26
MMP8P22894 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MMP8P22894 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
MMP8P22894 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP8P22894 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP8P22894 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
MMP8P22894 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP8P22894 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP8P22894 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP8P22894 KRT18P28-201ENST00000453838 1332 ntBASIC16.65■□□□□ 0.26
MMP8P22894 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP8P22894 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP8P22894 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
MMP8P22894 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP8P22894 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP8P22894 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP8P22894 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
MMP8P22894 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
MMP8P22894 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
MMP8P22894 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP8P22894 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP8P22894 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
MMP8P22894 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.64■□□□□ 0.25
MMP8P22894 C18orf15-201ENST00000623680 2534 ntBASIC16.64■□□□□ 0.25
MMP8P22894 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MMP8P22894 AC006486.2-201ENST00000624246 2199 ntBASIC16.64■□□□□ 0.25
MMP8P22894 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP8P22894 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP8P22894 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP8P22894 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms