Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CD53P19397 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD53P19397 RN7SL204P-201ENST00000582831 262 ntBASIC14.51□□□□□ -0.09
CD53P19397 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.51□□□□□ -0.09
CD53P19397 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.51□□□□□ -0.09
CD53P19397 AC012645.4-201ENST00000610691 1061 ntBASIC14.51□□□□□ -0.09
CD53P19397 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.51□□□□□ -0.09
CD53P19397 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CD53P19397 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.51□□□□□ -0.09
CD53P19397 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD53P19397 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD53P19397 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD53P19397 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD53P19397 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD53P19397 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.51□□□□□ -0.09
CD53P19397 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.51□□□□□ -0.09
CD53P19397 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.51□□□□□ -0.09
CD53P19397 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.51□□□□□ -0.09
CD53P19397 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.51□□□□□ -0.09
CD53P19397 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD53P19397 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD53P19397 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD53P19397 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.51□□□□□ -0.09
CD53P19397 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.51□□□□□ -0.09
CD53P19397 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD53P19397 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.5□□□□□ -0.09
CD53P19397 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.5□□□□□ -0.09
CD53P19397 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.5□□□□□ -0.09
CD53P19397 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CD53P19397 AC063926.3-201ENST00000624734 5658 ntBASIC14.5□□□□□ -0.09
CD53P19397 AC068587.6-202ENST00000641839 5619 ntBASIC14.5□□□□□ -0.09
CD53P19397 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CD53P19397 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD53P19397 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD53P19397 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
CD53P19397 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD53P19397 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.5□□□□□ -0.09
CD53P19397 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD53P19397 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD53P19397 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CD53P19397 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.5□□□□□ -0.09
CD53P19397 AC107890.1-201ENST00000422478 521 ntBASIC14.5□□□□□ -0.09
CD53P19397 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.5□□□□□ -0.09
CD53P19397 RBPMS2P1-201ENST00000437762 623 ntBASIC14.5□□□□□ -0.09
CD53P19397 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CD53P19397 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CD53P19397 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.5□□□□□ -0.09
CD53P19397 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD53P19397 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CD53P19397 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.5□□□□□ -0.09
CD53P19397 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.5□□□□□ -0.09
CD53P19397 AC005225.4-201ENST00000557330 545 ntBASIC14.5□□□□□ -0.09
CD53P19397 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.5□□□□□ -0.09
CD53P19397 RARRES2P8-201ENST00000566335 367 ntBASIC14.5□□□□□ -0.09
CD53P19397 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.5□□□□□ -0.09
CD53P19397 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.5□□□□□ -0.09
CD53P19397 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.5□□□□□ -0.09
CD53P19397 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD53P19397 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD53P19397 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.5□□□□□ -0.09
CD53P19397 AC008677.1-201ENST00000519230 1561 ntBASIC14.5□□□□□ -0.09
CD53P19397 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.5□□□□□ -0.09
CD53P19397 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD53P19397 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CD53P19397 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD53P19397 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD53P19397 AL353732.1-201ENST00000569618 1459 ntBASIC14.5□□□□□ -0.09
CD53P19397 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD53P19397 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CD53P19397 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CD53P19397 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CD53P19397 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.49□□□□□ -0.09
CD53P19397 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.49□□□□□ -0.09
CD53P19397 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CD53P19397 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CD53P19397 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.49□□□□□ -0.09
CD53P19397 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.49□□□□□ -0.09
CD53P19397 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.49□□□□□ -0.09
CD53P19397 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CD53P19397 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.49□□□□□ -0.09
CD53P19397 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 MIR661-201ENST00000384842 89 ntBASIC14.49□□□□□ -0.09
CD53P19397 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.49□□□□□ -0.09
CD53P19397 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.49□□□□□ -0.09
CD53P19397 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.49□□□□□ -0.09
CD53P19397 AC125807.1-201ENST00000483097 614 ntBASIC14.49□□□□□ -0.09
CD53P19397 AC107918.2-201ENST00000530817 355 ntBASIC14.49□□□□□ -0.09
CD53P19397 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.49□□□□□ -0.09
CD53P19397 AL109954.1-202ENST00000564051 2148 ntBASIC14.49□□□□□ -0.09
CD53P19397 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms