Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.06■□□□□ 0.32
CD58P19256 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CD58P19256 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
CD58P19256 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CD58P19256 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.06■□□□□ 0.32
CD58P19256 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 AC100757.3-201ENST00000622361 1406 ntBASIC17.06■□□□□ 0.32
CD58P19256 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
CD58P19256 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CD58P19256 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.06■□□□□ 0.32
CD58P19256 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CD58P19256 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CD58P19256 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.06■□□□□ 0.32
CD58P19256 AC055876.3-201ENST00000431496 288 ntBASIC17.06■□□□□ 0.32
CD58P19256 HIST3H2BA-201ENST00000436555 524 ntBASIC17.06■□□□□ 0.32
CD58P19256 EEF1DP4-201ENST00000446006 880 ntBASIC17.06■□□□□ 0.32
CD58P19256 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.06■□□□□ 0.32
CD58P19256 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CD58P19256 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.06■□□□□ 0.32
CD58P19256 AL450472.2-201ENST00000603663 1156 ntBASIC17.06■□□□□ 0.32
CD58P19256 AC138649.4-201ENST00000612222 287 ntBASIC17.06■□□□□ 0.32
CD58P19256 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CD58P19256 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CD58P19256 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CD58P19256 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.06■□□□□ 0.32
CD58P19256 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.06■□□□□ 0.32
CD58P19256 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CD58P19256 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CD58P19256 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
CD58P19256 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.06■□□□□ 0.32
CD58P19256 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.06■□□□□ 0.32
CD58P19256 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CD58P19256 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD58P19256 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CD58P19256 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.05■□□□□ 0.32
CD58P19256 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
CD58P19256 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD58P19256 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CD58P19256 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD58P19256 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.05■□□□□ 0.32
CD58P19256 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.05■□□□□ 0.32
CD58P19256 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CD58P19256 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CD58P19256 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CD58P19256 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.05■□□□□ 0.32
CD58P19256 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.05■□□□□ 0.32
CD58P19256 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CD58P19256 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD58P19256 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.05■□□□□ 0.32
CD58P19256 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CD58P19256 CICP13-201ENST00000422015 2789 ntBASIC17.05■□□□□ 0.32
CD58P19256 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD58P19256 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD58P19256 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.05■□□□□ 0.32
CD58P19256 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD58P19256 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CD58P19256 PHKG1P2-201ENST00000457537 863 ntBASIC17.05■□□□□ 0.32
CD58P19256 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.05■□□□□ 0.32
CD58P19256 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.05■□□□□ 0.32
CD58P19256 AC093214.1-201ENST00000511688 1107 ntBASIC17.05■□□□□ 0.32
CD58P19256 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD58P19256 AC005498.2-205ENST00000593218 784 ntBASIC17.05■□□□□ 0.32
CD58P19256 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD58P19256 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD58P19256 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD58P19256 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD58P19256 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.05■□□□□ 0.32
CD58P19256 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD58P19256 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.05■□□□□ 0.32
CD58P19256 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD58P19256 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CD58P19256 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD58P19256 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.04■□□□□ 0.32
CD58P19256 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.04■□□□□ 0.32
CD58P19256 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD58P19256 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.04■□□□□ 0.32
CD58P19256 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD58P19256 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CD58P19256 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms