Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SYN1P17600 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.06■□□□□ 0.32
SYN1P17600 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
SYN1P17600 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SYN1P17600 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SYN1P17600 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.06■□□□□ 0.32
SYN1P17600 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.06■□□□□ 0.32
SYN1P17600 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.06■□□□□ 0.32
SYN1P17600 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.06■□□□□ 0.32
SYN1P17600 OR6D1P-202ENST00000641007 5290 ntBASIC17.05■□□□□ 0.32
SYN1P17600 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SYN1P17600 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SYN1P17600 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.05■□□□□ 0.32
SYN1P17600 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.05■□□□□ 0.32
SYN1P17600 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 AC136604.1-201ENST00000418535 575 ntBASIC17.05■□□□□ 0.32
SYN1P17600 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.05■□□□□ 0.32
SYN1P17600 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.05■□□□□ 0.32
SYN1P17600 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.05■□□□□ 0.32
SYN1P17600 AC135983.4-201ENST00000564116 1262 ntBASIC17.05■□□□□ 0.32
SYN1P17600 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.05■□□□□ 0.32
SYN1P17600 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.05■□□□□ 0.32
SYN1P17600 AC009084.3-201ENST00000623356 437 ntBASIC17.05■□□□□ 0.32
SYN1P17600 BX539320.1-201ENST00000623759 877 ntBASIC17.05■□□□□ 0.32
SYN1P17600 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.05■□□□□ 0.32
SYN1P17600 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SYN1P17600 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SYN1P17600 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.05■□□□□ 0.32
SYN1P17600 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYN1P17600 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.04■□□□□ 0.32
SYN1P17600 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 AL138799.1-201ENST00000448213 1675 ntBASIC17.04■□□□□ 0.32
SYN1P17600 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SYN1P17600 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SYN1P17600 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.04■□□□□ 0.32
SYN1P17600 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.04■□□□□ 0.32
SYN1P17600 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.04■□□□□ 0.32
SYN1P17600 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.04■□□□□ 0.32
SYN1P17600 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.04■□□□□ 0.32
SYN1P17600 AC125604.1-201ENST00000496255 707 ntBASIC17.04■□□□□ 0.32
SYN1P17600 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.04■□□□□ 0.32
SYN1P17600 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.04■□□□□ 0.32
SYN1P17600 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
SYN1P17600 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SYN1P17600 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.04■□□□□ 0.32
SYN1P17600 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.04■□□□□ 0.32
SYN1P17600 AL450472.2-201ENST00000603663 1156 ntBASIC17.04■□□□□ 0.32
SYN1P17600 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.04■□□□□ 0.32
SYN1P17600 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.04■□□□□ 0.32
SYN1P17600 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SYN1P17600 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.04■□□□□ 0.32
SYN1P17600 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
SYN1P17600 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.04■□□□□ 0.32
SYN1P17600 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYN1P17600 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.04■□□□□ 0.32
SYN1P17600 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms