Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PCDH17O14917 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDH17O14917 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDH17O14917 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
PCDH17O14917 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDH17O14917 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDH17O14917 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 AC063926.3-201ENST00000624734 5658 ntBASIC15.21■□□□□ 0.03
PCDH17O14917 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH17O14917 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH17O14917 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH17O14917 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDH17O14917 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.21■□□□□ 0.03
PCDH17O14917 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDH17O14917 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH17O14917 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDH17O14917 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDH17O14917 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH17O14917 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PCDH17O14917 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH17O14917 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH17O14917 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDH17O14917 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH17O14917 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH17O14917 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH17O14917 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH17O14917 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH17O14917 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDH17O14917 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDH17O14917 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH17O14917 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDH17O14917 AL139010.1-201ENST00000454878 894 ntBASIC15.21■□□□□ 0.03
PCDH17O14917 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.21■□□□□ 0.03
PCDH17O14917 ZNF890P-202ENST00000530367 1156 ntBASIC15.21■□□□□ 0.03
PCDH17O14917 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDH17O14917 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDH17O14917 AL589739.1-201ENST00000607720 493 ntBASIC15.21■□□□□ 0.03
PCDH17O14917 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PCDH17O14917 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDH17O14917 AF228730.6-201ENST00000641497 218 ntBASIC15.21■□□□□ 0.03
PCDH17O14917 AC084121.3-201ENST00000641716 218 ntBASIC15.21■□□□□ 0.03
PCDH17O14917 AC105233.6-201ENST00000642093 218 ntBASIC15.21■□□□□ 0.03
PCDH17O14917 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDH17O14917 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH17O14917 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDH17O14917 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PCDH17O14917 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH17O14917 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH17O14917 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH17O14917 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH17O14917 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.21■□□□□ 0.02
PCDH17O14917 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PCDH17O14917 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDH17O14917 AC087499.5-201ENST00000452760 1342 ntBASIC15.2■□□□□ 0.02
PCDH17O14917 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
PCDH17O14917 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCDH17O14917 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 AC100757.3-201ENST00000622361 1406 ntBASIC15.2■□□□□ 0.02
PCDH17O14917 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PCDH17O14917 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 TERF1P3-201ENST00000505638 1227 ntBASIC15.2■□□□□ 0.02
PCDH17O14917 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 MIR4321-201ENST00000592276 80 ntBASIC15.2■□□□□ 0.02
PCDH17O14917 AC009118.2-201ENST00000613275 655 ntBASIC15.2■□□□□ 0.02
PCDH17O14917 SPDYE12P-201ENST00000618416 771 ntBASIC15.2■□□□□ 0.02
PCDH17O14917 AL590560.3-201ENST00000623350 461 ntBASIC15.2■□□□□ 0.02
PCDH17O14917 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDH17O14917 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PCDH17O14917 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDH17O14917 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDH17O14917 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDH17O14917 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDH17O14917 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDH17O14917 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH17O14917 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDH17O14917 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH17O14917 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH17O14917 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCDH17O14917 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms