Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 SDHAP3-202ENST00000515467 728 ntBASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 ZNF890P-202ENST00000530367 1156 ntBASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 AC004840.1-201ENST00000636359 365 ntBASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 AL607033.1-201ENST00000623900 1599 ntBASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 AC011270.2-201ENST00000624293 2550 ntBASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC4Q9Y5F7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 CICP13-201ENST00000422015 2789 ntBASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 FAM8A3P-201ENST00000427218 844 ntBASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 AJ011932.1-201ENST00000621707 465 ntBASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC4Q9Y5F7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC4Q9Y5F7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC4Q9Y5F7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC4Q9Y5F7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC4Q9Y5F7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC4Q9Y5F7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC4Q9Y5F7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC4Q9Y5F7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGC4Q9Y5F7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGC4Q9Y5F7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC4Q9Y5F7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGC4Q9Y5F7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC4Q9Y5F7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms