Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 ZNF736P1Y-201ENST00000440402 1276 ntBASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 AC133552.4-201ENST00000576103 676 ntBASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 AC015911.4-201ENST00000588022 1070 ntBASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 Z92544.3-201ENST00000624747 417 ntBASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 TUBB3P1-201ENST00000405796 1332 ntBASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 HYMAI-201ENST00000635591 3347 ntBASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
PCDHB13Q9Y5F0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 KRT8P37-201ENST00000451609 1420 ntBASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 SPDYE17-201ENST00000412399 783 ntBASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 AC007041.1-201ENST00000438989 1155 ntBASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 MTND6P24-201ENST00000440466 518 ntBASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 AL133215.2-201ENST00000609242 977 ntBASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHB13Q9Y5F0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 AP005117.1-202ENST00000581724 1908 ntBASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 EEF1DP4-201ENST00000446006 880 ntBASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 REXO1L1P-202ENST00000608646 1974 ntBASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms