Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 AC018892.3-201ENST00000623986 2499 ntBASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 AC055876.3-201ENST00000431496 288 ntBASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 AC241585.1-201ENST00000433527 519 ntBASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 IGHV3-42-201ENST00000520410 361 ntBASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 DUX4L27-201ENST00000554796 1261 ntBASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 AC138649.4-201ENST00000612222 287 ntBASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 AC093512.1-201ENST00000617969 520 ntBASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 AC007950.2-201ENST00000615045 2347 ntBASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 AL136379.1-201ENST00000623471 2642 ntBASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 ZNF890P-202ENST00000530367 1156 ntBASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 MIR4313-201ENST00000580760 101 ntBASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 AC097359.3-201ENST00000603982 1210 ntBASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 AC100757.3-201ENST00000622361 1406 ntBASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 HYMAI-201ENST00000635591 3347 ntBASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms