Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 AC063926.3-201ENST00000624734 5658 ntBASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 AL355306.1-201ENST00000415580 579 ntBASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 AC092474.2-201ENST00000424288 719 ntBASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 RPS8P6-201ENST00000426177 609 ntBASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 DNAJB3-202ENST00000449667 1266 ntBASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT11Q9UKZ1 LINC00552-201ENST00000625151 2579 ntBASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 PMS2P4-201ENST00000412466 1052 ntBASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 AP001160.2-201ENST00000596071 487 ntBASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 AC079781.4-201ENST00000641908 219 ntBASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT11Q9UKZ1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms