Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 AC112693.3-201ENST00000624819 1983 ntBASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 AC009407.1-201ENST00000568958 598 ntBASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.61■□□□□ 0.41
BLOC1S4Q9NUP1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 AC241585.1-201ENST00000433527 519 ntBASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 AC004890.2-204ENST00000481968 304 ntBASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 AC005498.2-205ENST00000593218 784 ntBASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BLOC1S4Q9NUP1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms