Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SP110Q9HB58 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.29■□□□□ 0.2
SP110Q9HB58 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SP110Q9HB58 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
SP110Q9HB58 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.29■□□□□ 0.2
SP110Q9HB58 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.29■□□□□ 0.2
SP110Q9HB58 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.29■□□□□ 0.2
SP110Q9HB58 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.29■□□□□ 0.2
SP110Q9HB58 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
SP110Q9HB58 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SP110Q9HB58 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.29■□□□□ 0.2
SP110Q9HB58 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.29■□□□□ 0.2
SP110Q9HB58 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.29■□□□□ 0.2
SP110Q9HB58 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.29■□□□□ 0.2
SP110Q9HB58 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.29■□□□□ 0.2
SP110Q9HB58 RN7SL618P-201ENST00000477850 296 ntBASIC16.29■□□□□ 0.2
SP110Q9HB58 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
SP110Q9HB58 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.29■□□□□ 0.2
SP110Q9HB58 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.29■□□□□ 0.2
SP110Q9HB58 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.29■□□□□ 0.2
SP110Q9HB58 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.29■□□□□ 0.2
SP110Q9HB58 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 AP005117.1-202ENST00000581724 1908 ntBASIC16.29■□□□□ 0.2
SP110Q9HB58 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.29■□□□□ 0.2
SP110Q9HB58 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SP110Q9HB58 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
SP110Q9HB58 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.29■□□□□ 0.2
SP110Q9HB58 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.28■□□□□ 0.2
SP110Q9HB58 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 AC100757.3-201ENST00000622361 1406 ntBASIC16.28■□□□□ 0.2
SP110Q9HB58 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SP110Q9HB58 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SP110Q9HB58 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SP110Q9HB58 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SP110Q9HB58 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.28■□□□□ 0.2
SP110Q9HB58 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SP110Q9HB58 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.28■□□□□ 0.2
SP110Q9HB58 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.28■□□□□ 0.2
SP110Q9HB58 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.28■□□□□ 0.2
SP110Q9HB58 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.28■□□□□ 0.2
SP110Q9HB58 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.28■□□□□ 0.2
SP110Q9HB58 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.28■□□□□ 0.2
SP110Q9HB58 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
SP110Q9HB58 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SP110Q9HB58 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.28■□□□□ 0.2
SP110Q9HB58 AL033527.5-202ENST00000641632 1098 ntBASIC16.28■□□□□ 0.2
SP110Q9HB58 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.28■□□□□ 0.2
SP110Q9HB58 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SP110Q9HB58 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SP110Q9HB58 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SP110Q9HB58 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.28■□□□□ 0.2
SP110Q9HB58 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.28■□□□□ 0.2
SP110Q9HB58 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SP110Q9HB58 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SP110Q9HB58 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SP110Q9HB58 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SP110Q9HB58 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SP110Q9HB58 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.27■□□□□ 0.2
SP110Q9HB58 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SP110Q9HB58 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SP110Q9HB58 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
SP110Q9HB58 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SP110Q9HB58 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SP110Q9HB58 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SP110Q9HB58 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SP110Q9HB58 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SP110Q9HB58 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SP110Q9HB58 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.27■□□□□ 0.2
SP110Q9HB58 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.27■□□□□ 0.2
SP110Q9HB58 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms