Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 AL139011.1-202ENST00000642063 584 ntBASIC18.1■□□□□ 0.49
CCDC94Q9BW85 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC94Q9BW85 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 AL645728.1-201ENST00000366221 2101 ntBASIC18.09■□□□□ 0.49
CCDC94Q9BW85 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 SPCS2P4-201ENST00000436160 681 ntBASIC18.09■□□□□ 0.49
CCDC94Q9BW85 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC94Q9BW85 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CCDC94Q9BW85 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CCDC94Q9BW85 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.08■□□□□ 0.49
CCDC94Q9BW85 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC94Q9BW85 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC94Q9BW85 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC94Q9BW85 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CCDC94Q9BW85 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC94Q9BW85 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 KRT8P23-201ENST00000560090 1207 ntBASIC18.08■□□□□ 0.48
CCDC94Q9BW85 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 SNX33P1-201ENST00000592116 1762 ntBASIC18.08■□□□□ 0.48
CCDC94Q9BW85 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCDC94Q9BW85 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms