Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.14□□□□□ -0.15
VRK1Q99986 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 SLC25A39P2-201ENST00000537614 270 ntBASIC14.14□□□□□ -0.15
VRK1Q99986 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
VRK1Q99986 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.14□□□□□ -0.15
VRK1Q99986 AC092364.2-202ENST00000597012 1073 ntBASIC14.14□□□□□ -0.15
VRK1Q99986 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.14□□□□□ -0.15
VRK1Q99986 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.14□□□□□ -0.15
VRK1Q99986 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.14□□□□□ -0.15
VRK1Q99986 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VRK1Q99986 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VRK1Q99986 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VRK1Q99986 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
VRK1Q99986 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 AL391256.1-201ENST00000443260 1855 ntBASIC14.14□□□□□ -0.15
VRK1Q99986 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.14□□□□□ -0.15
VRK1Q99986 TUBB3P1-201ENST00000405796 1332 ntBASIC14.14□□□□□ -0.15
VRK1Q99986 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.14□□□□□ -0.15
VRK1Q99986 AC006058.4-201ENST00000624016 1670 ntBASIC14.14□□□□□ -0.15
VRK1Q99986 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VRK1Q99986 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
VRK1Q99986 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
VRK1Q99986 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VRK1Q99986 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.13□□□□□ -0.15
VRK1Q99986 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.13□□□□□ -0.15
VRK1Q99986 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.13□□□□□ -0.15
VRK1Q99986 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
VRK1Q99986 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
VRK1Q99986 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
VRK1Q99986 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.13□□□□□ -0.15
VRK1Q99986 SPDYE7P-202ENST00000420373 878 ntBASIC14.13□□□□□ -0.15
VRK1Q99986 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.13□□□□□ -0.15
VRK1Q99986 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.13□□□□□ -0.15
VRK1Q99986 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.13□□□□□ -0.15
VRK1Q99986 HLA-J-202ENST00000469281 1241 ntBASIC14.13□□□□□ -0.15
VRK1Q99986 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.13□□□□□ -0.15
VRK1Q99986 LINC01225-203ENST00000563550 1244 ntBASIC14.13□□□□□ -0.15
VRK1Q99986 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.13□□□□□ -0.15
VRK1Q99986 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.13□□□□□ -0.15
VRK1Q99986 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 MIR6080-201ENST00000617359 66 ntBASIC14.13□□□□□ -0.15
VRK1Q99986 AP001059.3-201ENST00000619053 235 ntBASIC14.13□□□□□ -0.15
VRK1Q99986 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
VRK1Q99986 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
VRK1Q99986 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
VRK1Q99986 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.13□□□□□ -0.15
VRK1Q99986 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.13□□□□□ -0.15
VRK1Q99986 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VRK1Q99986 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.13□□□□□ -0.15
VRK1Q99986 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.12□□□□□ -0.15
VRK1Q99986 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.12□□□□□ -0.15
VRK1Q99986 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.12□□□□□ -0.15
VRK1Q99986 FAM45BP-202ENST00000592932 1624 ntBASIC14.12□□□□□ -0.15
VRK1Q99986 AC006277.1-201ENST00000624348 1610 ntBASIC14.12□□□□□ -0.15
VRK1Q99986 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
VRK1Q99986 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VRK1Q99986 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VRK1Q99986 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.12□□□□□ -0.15
VRK1Q99986 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VRK1Q99986 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.12□□□□□ -0.15
VRK1Q99986 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.12□□□□□ -0.15
VRK1Q99986 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.12□□□□□ -0.15
VRK1Q99986 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms