Protein–RNA interactions for Protein: Q99963

SH3GL3, Endophilin-A3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3Q99963 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3GL3Q99963 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3GL3Q99963 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SH3GL3Q99963 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 AC003669.1-201ENST00000334569 611 ntBASIC15.31■□□□□ 0.04
SH3GL3Q99963 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 AP001269.4-201ENST00000609611 512 ntBASIC15.31■□□□□ 0.04
SH3GL3Q99963 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 AP000867.4-201ENST00000641616 219 ntBASIC15.31■□□□□ 0.04
SH3GL3Q99963 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3GL3Q99963 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SH3GL3Q99963 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 AC009336.1-201ENST00000608941 1553 ntBASIC15.3■□□□□ 0.04
SH3GL3Q99963 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SH3GL3Q99963 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3GL3Q99963 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms