Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF31Q96EP0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF31Q96EP0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RNF31Q96EP0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF31Q96EP0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF31Q96EP0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF31Q96EP0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF31Q96EP0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF31Q96EP0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RNF31Q96EP0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF31Q96EP0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF31Q96EP0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF31Q96EP0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF31Q96EP0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RNF31Q96EP0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 AL136982.4-201ENST00000437689 1740 ntBASIC15.4■□□□□ 0.06
RNF31Q96EP0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF31Q96EP0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF31Q96EP0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF31Q96EP0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF31Q96EP0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF31Q96EP0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.4■□□□□ 0.06
RNF31Q96EP0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.4■□□□□ 0.06
RNF31Q96EP0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.4■□□□□ 0.06
RNF31Q96EP0 HLA-J-202ENST00000469281 1241 ntBASIC15.4■□□□□ 0.06
RNF31Q96EP0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF31Q96EP0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
RNF31Q96EP0 AC008494.3-201ENST00000606615 944 ntBASIC15.4■□□□□ 0.06
RNF31Q96EP0 AC020765.3-201ENST00000613051 740 ntBASIC15.4■□□□□ 0.06
RNF31Q96EP0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF31Q96EP0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF31Q96EP0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.39■□□□□ 0.06
RNF31Q96EP0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 AC007274.1-201ENST00000439805 662 ntBASIC15.39■□□□□ 0.05
RNF31Q96EP0 API5-211ENST00000534695 560 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 AL008721.1-201ENST00000609964 604 ntBASIC15.39■□□□□ 0.05
RNF31Q96EP0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF31Q96EP0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF31Q96EP0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF31Q96EP0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF31Q96EP0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RNF31Q96EP0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
RNF31Q96EP0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF31Q96EP0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF31Q96EP0 GGT3P-204ENST00000453783 1664 ntBASIC15.38■□□□□ 0.05
RNF31Q96EP0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF31Q96EP0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms