Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC007967.4-201ENST00000614700 386 ntBASIC16.18■□□□□ 0.18
RTP4Q96DX8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTP4Q96DX8 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.18■□□□□ 0.18
RTP4Q96DX8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTP4Q96DX8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTP4Q96DX8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTP4Q96DX8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTP4Q96DX8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTP4Q96DX8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTP4Q96DX8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTP4Q96DX8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTP4Q96DX8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTP4Q96DX8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTP4Q96DX8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTP4Q96DX8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTP4Q96DX8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTP4Q96DX8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 AC011467.4-201ENST00000594891 528 ntBASIC16.17■□□□□ 0.18
RTP4Q96DX8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 AC009093.7-201ENST00000623853 1223 ntBASIC16.17■□□□□ 0.18
RTP4Q96DX8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTP4Q96DX8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTP4Q96DX8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTP4Q96DX8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RTP4Q96DX8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTP4Q96DX8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.17■□□□□ 0.18
RTP4Q96DX8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RTP4Q96DX8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTP4Q96DX8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTP4Q96DX8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTP4Q96DX8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTP4Q96DX8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTP4Q96DX8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.16■□□□□ 0.18
RTP4Q96DX8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTP4Q96DX8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTP4Q96DX8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RTP4Q96DX8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTP4Q96DX8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 FAM8A3P-201ENST00000427218 844 ntBASIC16.16■□□□□ 0.18
RTP4Q96DX8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 AC109322.1-201ENST00000524499 1264 ntBASIC16.16■□□□□ 0.18
RTP4Q96DX8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 AC025678.2-201ENST00000562061 970 ntBASIC16.16■□□□□ 0.18
RTP4Q96DX8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 AC092364.2-202ENST00000597012 1073 ntBASIC16.16■□□□□ 0.18
RTP4Q96DX8 LINC00628-201ENST00000628516 1289 ntBASIC16.16■□□□□ 0.18
RTP4Q96DX8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTP4Q96DX8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RTP4Q96DX8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RTP4Q96DX8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms