Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 BX539320.1-201ENST00000623759 877 ntBASIC13.62□□□□□ -0.23
USP9XQ93008 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
USP9XQ93008 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.62□□□□□ -0.23
USP9XQ93008 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.62□□□□□ -0.23
USP9XQ93008 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USP9XQ93008 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
USP9XQ93008 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USP9XQ93008 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USP9XQ93008 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
USP9XQ93008 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
USP9XQ93008 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USP9XQ93008 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.62□□□□□ -0.23
USP9XQ93008 AC078991.1-201ENST00000437297 610 ntBASIC13.62□□□□□ -0.23
USP9XQ93008 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.62□□□□□ -0.23
USP9XQ93008 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.62□□□□□ -0.23
USP9XQ93008 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.62□□□□□ -0.23
USP9XQ93008 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
USP9XQ93008 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
USP9XQ93008 AP005019.2-201ENST00000615104 511 ntBASIC13.62□□□□□ -0.23
USP9XQ93008 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.62□□□□□ -0.23
USP9XQ93008 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
USP9XQ93008 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
USP9XQ93008 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
USP9XQ93008 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.61□□□□□ -0.23
USP9XQ93008 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC13.61□□□□□ -0.23
USP9XQ93008 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
USP9XQ93008 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 RN7SKP214-201ENST00000364208 315 ntBASIC13.61□□□□□ -0.23
USP9XQ93008 RNU1-114P-201ENST00000365297 166 ntBASIC13.61□□□□□ -0.23
USP9XQ93008 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 AP001582.1-201ENST00000525856 295 ntBASIC13.61□□□□□ -0.23
USP9XQ93008 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
USP9XQ93008 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.61□□□□□ -0.23
USP9XQ93008 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.61□□□□□ -0.23
USP9XQ93008 AL022344.2-201ENST00000568976 968 ntBASIC13.61□□□□□ -0.23
USP9XQ93008 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.61□□□□□ -0.23
USP9XQ93008 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.61□□□□□ -0.23
USP9XQ93008 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.61□□□□□ -0.23
USP9XQ93008 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.61□□□□□ -0.23
USP9XQ93008 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
USP9XQ93008 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.61□□□□□ -0.23
USP9XQ93008 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.61□□□□□ -0.23
USP9XQ93008 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.61□□□□□ -0.23
USP9XQ93008 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
USP9XQ93008 AC106794.1-201ENST00000506935 792 ntBASIC13.61□□□□□ -0.23
USP9XQ93008 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.61□□□□□ -0.23
USP9XQ93008 AL138799.1-201ENST00000448213 1675 ntBASIC13.61□□□□□ -0.23
USP9XQ93008 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
USP9XQ93008 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
USP9XQ93008 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
USP9XQ93008 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
USP9XQ93008 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
USP9XQ93008 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.6□□□□□ -0.23
USP9XQ93008 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
USP9XQ93008 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
USP9XQ93008 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
USP9XQ93008 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
USP9XQ93008 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.6□□□□□ -0.23
USP9XQ93008 AC104073.2-201ENST00000453737 312 ntBASIC13.6□□□□□ -0.23
USP9XQ93008 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
USP9XQ93008 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.6□□□□□ -0.23
USP9XQ93008 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.6□□□□□ -0.23
USP9XQ93008 AC244157.2-201ENST00000616239 1006 ntBASIC13.6□□□□□ -0.23
USP9XQ93008 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.6□□□□□ -0.23
USP9XQ93008 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.6□□□□□ -0.23
USP9XQ93008 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
USP9XQ93008 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.6□□□□□ -0.23
USP9XQ93008 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
USP9XQ93008 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
USP9XQ93008 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.6□□□□□ -0.23
USP9XQ93008 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
USP9XQ93008 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
USP9XQ93008 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.6□□□□□ -0.23
USP9XQ93008 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
USP9XQ93008 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
USP9XQ93008 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
USP9XQ93008 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC13.6□□□□□ -0.23
USP9XQ93008 KLF2P2-201ENST00000416807 1039 ntBASIC13.6□□□□□ -0.23
USP9XQ93008 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC13.6□□□□□ -0.23
USP9XQ93008 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms