Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 AC025580.3-201ENST00000617932 1424 ntBASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 AC074386.1-202ENST00000463561 864 ntBASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 C20orf181-201ENST00000623918 480 ntBASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 AC079781.4-201ENST00000641908 219 ntBASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 TCAF2P1-201ENST00000291129 2421 ntBASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 CICP24-201ENST00000605464 2705 ntBASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40AQ8WXH6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 HCG4-201ENST00000418983 998 ntBASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 AL513480.1-201ENST00000451731 511 ntBASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 AL691403.2-201ENST00000618460 490 ntBASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 AC055717.3-201ENST00000622967 595 ntBASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40AQ8WXH6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms