Protein–RNA interactions for Protein: Q8WWF5

ZNRF4, E3 ubiquitin-protein ligase ZNRF4, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF4Q8WWF5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 MIR346-201ENST00000362234 95 ntBASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 SPCS2P4-201ENST00000436160 681 ntBASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 KRT8P48-201ENST00000515599 1220 ntBASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 AC024267.1-201ENST00000582320 895 ntBASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 FAM197Y3-203ENST00000618346 717 ntBASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 AC127383.1-201ENST00000444697 1800 ntBASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 TCAF2P1-201ENST00000291129 2421 ntBASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNRF4Q8WWF5 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 RPS8P6-201ENST00000426177 609 ntBASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 FAM58CP-201ENST00000435741 640 ntBASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 AL591424.1-201ENST00000442569 1213 ntBASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 RNA5SP410-201ENST00000516285 106 ntBASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNRF4Q8WWF5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms