Protein–RNA interactions for Protein: Q8TC56

FAM71B, Protein FAM71B, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM71BQ8TC56 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 KRT18P3-201ENST00000451602 1288 ntBASIC17.05■□□□□ 0.32
FAM71BQ8TC56 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 AC068137.2-201ENST00000605408 478 ntBASIC17.05■□□□□ 0.32
FAM71BQ8TC56 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.05■□□□□ 0.32
FAM71BQ8TC56 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 RNA5SP416-201ENST00000516838 111 ntBASIC17.04■□□□□ 0.32
FAM71BQ8TC56 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.04■□□□□ 0.32
FAM71BQ8TC56 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 MIR648-201ENST00000385046 94 ntBASIC17.03■□□□□ 0.32
FAM71BQ8TC56 MED15P5-201ENST00000423150 992 ntBASIC17.03■□□□□ 0.32
FAM71BQ8TC56 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FAM71BQ8TC56 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms