Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC138969.2-201ENST00000532739 9932 ntBASIC13.83□□□□□ -0.2
BEST4Q8NFU0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.83□□□□□ -0.2
BEST4Q8NFU0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.83□□□□□ -0.2
BEST4Q8NFU0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 PTCHD3P3-201ENST00000403073 906 ntBASIC13.82□□□□□ -0.2
BEST4Q8NFU0 HCG4-201ENST00000418983 998 ntBASIC13.82□□□□□ -0.2
BEST4Q8NFU0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 SLC25A6P2-201ENST00000497974 877 ntBASIC13.82□□□□□ -0.2
BEST4Q8NFU0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 AC005412.3-201ENST00000580309 715 ntBASIC13.82□□□□□ -0.2
BEST4Q8NFU0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 AGAP7P-201ENST00000582299 2062 ntBASIC13.82□□□□□ -0.2
BEST4Q8NFU0 AGAP14-201ENST00000624701 2060 ntBASIC13.82□□□□□ -0.2
BEST4Q8NFU0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 IER3-202ENST00000376377 1350 ntBASIC13.82□□□□□ -0.2
BEST4Q8NFU0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BEST4Q8NFU0 AL137784.3-201ENST00000623858 2288 ntBASIC13.81□□□□□ -0.2
BEST4Q8NFU0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 AC010327.5-201ENST00000586923 3061 ntBASIC13.81□□□□□ -0.2
BEST4Q8NFU0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 RBM17P3-201ENST00000417687 1192 ntBASIC13.81□□□□□ -0.2
BEST4Q8NFU0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 AC107918.2-201ENST00000530817 355 ntBASIC13.81□□□□□ -0.2
BEST4Q8NFU0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.81□□□□□ -0.2
BEST4Q8NFU0 AC004706.3-202ENST00000621574 984 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms