Protein–RNA interactions for Protein: Q8NBP0

TTC13, Tetratricopeptide repeat protein 13, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13Q8NBP0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TTC13Q8NBP0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TTC13Q8NBP0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TTC13Q8NBP0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.52■□□□□ 0.23
TTC13Q8NBP0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.52■□□□□ 0.23
TTC13Q8NBP0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.52■□□□□ 0.23
TTC13Q8NBP0 AC144831.1-201ENST00000573312 2656 ntBASIC16.52■□□□□ 0.23
TTC13Q8NBP0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.52■□□□□ 0.23
TTC13Q8NBP0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TTC13Q8NBP0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.52■□□□□ 0.23
TTC13Q8NBP0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 AL109954.1-202ENST00000564051 2148 ntBASIC16.51■□□□□ 0.23
TTC13Q8NBP0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 MCCD1P2-201ENST00000423228 335 ntBASIC16.51■□□□□ 0.23
TTC13Q8NBP0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 IGHV3-62-201ENST00000520057 340 ntBASIC16.51■□□□□ 0.23
TTC13Q8NBP0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 AC006486.2-201ENST00000624246 2199 ntBASIC16.51■□□□□ 0.23
TTC13Q8NBP0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
TTC13Q8NBP0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 AC092127.1-201ENST00000567093 3455 ntBASIC16.5■□□□□ 0.23
TTC13Q8NBP0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 AC023274.1-201ENST00000418278 595 ntBASIC16.5■□□□□ 0.23
TTC13Q8NBP0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 SPCS2P4-201ENST00000436160 681 ntBASIC16.5■□□□□ 0.23
TTC13Q8NBP0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.5■□□□□ 0.23
TTC13Q8NBP0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 RN7SL718P-201ENST00000581254 303 ntBASIC16.5■□□□□ 0.23
TTC13Q8NBP0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.5■□□□□ 0.23
TTC13Q8NBP0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms