Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 MEP1AP4-201ENST00000423244 1087 ntBASIC17.28■□□□□ 0.36
VPS52Q8N1B4 MYCLP2-201ENST00000449268 967 ntBASIC17.28■□□□□ 0.36
VPS52Q8N1B4 AL589987.1-201ENST00000453380 819 ntBASIC17.28■□□□□ 0.36
VPS52Q8N1B4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 AL162274.1-201ENST00000617191 1098 ntBASIC17.28■□□□□ 0.36
VPS52Q8N1B4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
VPS52Q8N1B4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS52Q8N1B4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS52Q8N1B4 AC006449.5-201ENST00000610658 2098 ntBASIC17.27■□□□□ 0.36
VPS52Q8N1B4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS52Q8N1B4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS52Q8N1B4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
VPS52Q8N1B4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
VPS52Q8N1B4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.27■□□□□ 0.36
VPS52Q8N1B4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.27■□□□□ 0.36
VPS52Q8N1B4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS52Q8N1B4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.27■□□□□ 0.36
VPS52Q8N1B4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS52Q8N1B4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.27■□□□□ 0.36
VPS52Q8N1B4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.27■□□□□ 0.36
VPS52Q8N1B4 AC017083.2-201ENST00000608069 979 ntBASIC17.27■□□□□ 0.36
VPS52Q8N1B4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS52Q8N1B4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.27■□□□□ 0.35
VPS52Q8N1B4 AC006538.1-201ENST00000567905 1585 ntBASIC17.27■□□□□ 0.35
VPS52Q8N1B4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.27■□□□□ 0.35
VPS52Q8N1B4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VPS52Q8N1B4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VPS52Q8N1B4 AC126755.1-201ENST00000525846 6405 ntBASIC17.27■□□□□ 0.35
VPS52Q8N1B4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.27■□□□□ 0.35
VPS52Q8N1B4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
VPS52Q8N1B4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VPS52Q8N1B4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.27■□□□□ 0.35
VPS52Q8N1B4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.27■□□□□ 0.35
VPS52Q8N1B4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VPS52Q8N1B4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms