Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.3□□□□□ -0.28
ZNF546Q86UE3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 REXO1L1P-202ENST00000608646 1974 ntBASIC13.29□□□□□ -0.28
ZNF546Q86UE3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ZNF546Q86UE3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 SLC22A20-204ENST00000530038 1673 ntBASIC13.28□□□□□ -0.28
ZNF546Q86UE3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 INTS4P1-203ENST00000641008 3683 ntBASIC13.28□□□□□ -0.28
ZNF546Q86UE3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
ZNF546Q86UE3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms