Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 AC025048.3-201ENST00000590609 569 ntBASIC15.26■□□□□ 0.03
RNF44Q7L0R7 AC008738.7-201ENST00000609744 511 ntBASIC15.26■□□□□ 0.03
RNF44Q7L0R7 AC005702.4-201ENST00000618393 416 ntBASIC15.26■□□□□ 0.03
RNF44Q7L0R7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 AC018695.7-201ENST00000624587 2492 ntBASIC15.26■□□□□ 0.03
RNF44Q7L0R7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 AC008741.2-201ENST00000612792 3115 ntBASIC15.26■□□□□ 0.03
RNF44Q7L0R7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 LINC02447-202ENST00000501888 2146 ntBASIC15.25■□□□□ 0.03
RNF44Q7L0R7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 FAM8A3P-201ENST00000427218 844 ntBASIC15.25■□□□□ 0.03
RNF44Q7L0R7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 SDHAP3-202ENST00000515467 728 ntBASIC15.25■□□□□ 0.03
RNF44Q7L0R7 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 AC044860.1-202ENST00000559481 777 ntBASIC15.25■□□□□ 0.03
RNF44Q7L0R7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 AL450472.2-201ENST00000603663 1156 ntBASIC15.25■□□□□ 0.03
RNF44Q7L0R7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 AL513523.2-202ENST00000427283 2040 ntBASIC15.25■□□□□ 0.03
RNF44Q7L0R7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 AL603832.2-201ENST00000566195 2125 ntBASIC15.25■□□□□ 0.03
RNF44Q7L0R7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF44Q7L0R7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms