Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 AC027139.1-201ENST00000565286 951 ntBASIC13.55□□□□□ -0.24
LRRK2Q5S007 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.54□□□□□ -0.24
LRRK2Q5S007 FAU-202ENST00000434372 533 ntTSL 2 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 AL031713.1-201ENST00000564813 661 ntBASIC13.54□□□□□ -0.24
LRRK2Q5S007 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 PIN4P1-201ENST00000451079 396 ntBASIC13.54□□□□□ -0.24
LRRK2Q5S007 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 MIR4649-201ENST00000582839 64 ntBASIC13.54□□□□□ -0.24
LRRK2Q5S007 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.54□□□□□ -0.24
LRRK2Q5S007 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LRRK2Q5S007 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 RTN3P1-201ENST00000536295 711 ntBASIC13.53□□□□□ -0.24
LRRK2Q5S007 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 AC087045.2-201ENST00000606279 1003 ntBASIC13.53□□□□□ -0.24
LRRK2Q5S007 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms