Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKL1Q00532 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CDKL1Q00532 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDKL1Q00532 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKL1Q00532 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDKL1Q00532 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDKL1Q00532 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.69■□□□□ 0.1
CDKL1Q00532 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKL1Q00532 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.69■□□□□ 0.1
CDKL1Q00532 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 AC134407.2-201ENST00000625089 1978 ntBASIC15.69■□□□□ 0.1
CDKL1Q00532 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDKL1Q00532 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.69■□□□□ 0.1
CDKL1Q00532 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.68■□□□□ 0.1
CDKL1Q00532 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDKL1Q00532 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.68■□□□□ 0.1
CDKL1Q00532 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDKL1Q00532 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.68■□□□□ 0.1
CDKL1Q00532 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.68■□□□□ 0.1
CDKL1Q00532 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 AP3S2-216ENST00000617003 1561 ntBASIC15.68■□□□□ 0.1
CDKL1Q00532 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDKL1Q00532 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.68■□□□□ 0.1
CDKL1Q00532 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.68■□□□□ 0.1
CDKL1Q00532 AP000344.2-201ENST00000512987 629 ntBASIC15.68■□□□□ 0.1
CDKL1Q00532 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.68■□□□□ 0.1
CDKL1Q00532 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.68■□□□□ 0.1
CDKL1Q00532 MIR4469-201ENST00000583919 79 ntBASIC15.68■□□□□ 0.1
CDKL1Q00532 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.68■□□□□ 0.1
CDKL1Q00532 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.68■□□□□ 0.1
CDKL1Q00532 AC026979.3-201ENST00000607315 403 ntBASIC15.68■□□□□ 0.1
CDKL1Q00532 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.68■□□□□ 0.1
CDKL1Q00532 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CDKL1Q00532 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDKL1Q00532 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.68■□□□□ 0.1
CDKL1Q00532 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDKL1Q00532 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.68■□□□□ 0.1
CDKL1Q00532 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CDKL1Q00532 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CDKL1Q00532 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL1Q00532 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.67■□□□□ 0.1
CDKL1Q00532 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.67■□□□□ 0.1
CDKL1Q00532 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.67■□□□□ 0.1
CDKL1Q00532 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDKL1Q00532 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 BX842568.4-201ENST00000421222 227 ntBASIC15.67■□□□□ 0.1
CDKL1Q00532 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 AL139010.1-201ENST00000454878 894 ntBASIC15.67■□□□□ 0.1
CDKL1Q00532 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.67■□□□□ 0.1
CDKL1Q00532 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.67■□□□□ 0.1
CDKL1Q00532 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.67■□□□□ 0.1
CDKL1Q00532 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.67■□□□□ 0.1
CDKL1Q00532 RARRES2P9-201ENST00000565168 469 ntBASIC15.67■□□□□ 0.1
CDKL1Q00532 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 MIR3687-2-201ENST00000577708 61 ntBASIC15.67■□□□□ 0.1
CDKL1Q00532 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.67■□□□□ 0.1
CDKL1Q00532 MIR3687-1-201ENST00000614492 61 ntBASIC15.67■□□□□ 0.1
CDKL1Q00532 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.67■□□□□ 0.1
CDKL1Q00532 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL1Q00532 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms