Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 STK25P1-201ENST00000585406 838 ntBASIC16.66■□□□□ 0.26
CBX1P83916 AC073195.1-201ENST00000607241 877 ntBASIC16.66■□□□□ 0.26
CBX1P83916 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CBX1P83916 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CBX1P83916 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CBX1P83916 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CBX1P83916 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC16.66■□□□□ 0.26
CBX1P83916 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CBX1P83916 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC16.66■□□□□ 0.26
CBX1P83916 SLC9A3P3-201ENST00000457608 2229 ntBASIC16.66■□□□□ 0.26
CBX1P83916 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CBX1P83916 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.66■□□□□ 0.26
CBX1P83916 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CBX1P83916 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CBX1P83916 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CBX1P83916 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CBX1P83916 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CBX1P83916 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC16.66■□□□□ 0.26
CBX1P83916 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC16.66■□□□□ 0.26
CBX1P83916 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CBX1P83916 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC16.66■□□□□ 0.26
CBX1P83916 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CBX1P83916 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CBX1P83916 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CBX1P83916 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CBX1P83916 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CBX1P83916 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CBX1P83916 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CBX1P83916 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.65■□□□□ 0.26
CBX1P83916 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.65■□□□□ 0.26
CBX1P83916 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.65■□□□□ 0.26
CBX1P83916 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CBX1P83916 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.65■□□□□ 0.26
CBX1P83916 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CBX1P83916 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CBX1P83916 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CBX1P83916 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.64■□□□□ 0.26
CBX1P83916 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.64■□□□□ 0.26
CBX1P83916 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.64■□□□□ 0.25
CBX1P83916 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CBX1P83916 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
CBX1P83916 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.64■□□□□ 0.25
CBX1P83916 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.64■□□□□ 0.25
CBX1P83916 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.64■□□□□ 0.25
CBX1P83916 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.64■□□□□ 0.25
CBX1P83916 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 RNA5SP413-201ENST00000516373 109 ntBASIC16.64■□□□□ 0.25
CBX1P83916 AC090192.1-201ENST00000517740 490 ntBASIC16.64■□□□□ 0.25
CBX1P83916 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.64■□□□□ 0.25
CBX1P83916 RN7SL471P-201ENST00000580476 299 ntBASIC16.64■□□□□ 0.25
CBX1P83916 AF186192.3-201ENST00000583427 947 ntBASIC16.64■□□□□ 0.25
CBX1P83916 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.64■□□□□ 0.25
CBX1P83916 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.64■□□□□ 0.25
CBX1P83916 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CBX1P83916 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.64■□□□□ 0.25
CBX1P83916 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.64■□□□□ 0.25
CBX1P83916 AL592424.1-201ENST00000563624 1536 ntBASIC16.64■□□□□ 0.25
CBX1P83916 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CBX1P83916 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.64■□□□□ 0.25
CBX1P83916 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.64■□□□□ 0.25
CBX1P83916 AL049757.1-201ENST00000616842 1596 ntBASIC16.64■□□□□ 0.25
CBX1P83916 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.64■□□□□ 0.25
CBX1P83916 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.64■□□□□ 0.25
CBX1P83916 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX1P83916 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms